MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,335
rRNA: 8
tRNA: 72
tmRNA: 1
Total number of protein coding genes annotated/found:
4,123
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 207 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5013|JADGKQ010000232.1
MBF0732121.1
Genome Viewer
NA
AA
211/70
212-1
IS66 family transposase
SEQF5013|JADGKQ010000230.1
MBF0732120.1
Genome Viewer
NA
AA
219/73
220-1
IS66 family transposase
SEQF5013|JADGKQ010000229.1
MBF0732119.1
Genome Viewer
NA
AA
219/73
220-1
IS66 family transposase
SEQF5013|JADGKQ010000228.1
MBF0732118.1
Genome Viewer
NA
AA
174/58
1-174
hypothetical protein
SEQF5013|JADGKQ010000227.1
MBF0732117.1
Genome Viewer
NA
AA
221/73
221-1
transposase
SEQF5013|JADGKQ010000226.1
MBF0732116.1
Genome Viewer
NA
AA
220/73
222-1
hypothetical protein
SEQF5013|JADGKQ010000225.1
MBF0732115.1
Genome Viewer
NA
AA
84/28
148-231
transcriptional regulator
SEQF5013|JADGKQ010000224.1
MBF0732114.1
Genome Viewer
NA
AA
235/78
236-1
IS66 family transposase
SEQF5013|JADGKQ010000222.1
MBF0732113.1
Genome Viewer
NA
AA
201/67
1-203
IS66 family insertion sequence element accessory protein TnpB
SEQF5013|JADGKQ010000219.1
MBF0732112.1
Genome Viewer
NA
AA
252/84
253-1
IS66 family transposase
SEQF5013|JADGKQ010000212.1
MBF0732111.1
Genome Viewer
NA
AA
253/84
1-255
transposase
SEQF5013|JADGKQ010000210.1
MBF0732110.1
Genome Viewer
NA
AA
259/86
1-259
IS66 family transposase
SEQF5013|JADGKQ010000203.1
MBF0732109.1
Genome Viewer
NA
AA
305/101
1-305
tyrosine-type recombinase/integrase
SEQF5013|JADGKQ010000198.1
MBF0732108.1
Genome Viewer
NA
AA
251/83
251-1
PD-(D/E)XK nuclease family transposase
SEQF5013|JADGKQ010000196.1
MBF0732107.1
Genome Viewer
NA
AA
272/90
82-353
IS66 family insertion sequence element accessory protein TnpB
SEQF5013|JADGKQ010000195.1
MBF0732106.1
Genome Viewer
NA
AA
351/117
10-360
IS66 family transposase
SEQF5013|JADGKQ010000192.1
MBF0732105.1
Genome Viewer
NA
AA
204/68
379-176
transposase
SEQF5013|JADGKQ010000191.1
MBF0732104.1
Genome Viewer
NA
AA
378/126
1-379
AMP-binding protein
SEQF5013|JADGKQ010000190.1
MBF0732103.1
Genome Viewer
NA
AA
129/43
1-130
transposase
SEQF5013|JADGKQ010000188.1
MBF0732102.1
Genome Viewer
NA
AA
382/127
384-1
bifunctional isocitrate dehydrogenase kinase/phosphatase
Items 1 - 20
🡆
click arrow to navigate by page or
of 207 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
